CrawlJobs Logo

Senior Scientist – Research Computational Biology

amgen.com Logo

Amgen

Location Icon

Location:
United States

Category Icon

Job Type Icon

Contract Type:
Not provided

Salary Icon

Salary:

143320.00 - 174539.00 USD / Year

Job Description:

Join Amgen’s Mission of Serving Patients. The ARIA Computational Biology team is seeking a talented and creative computational biologist to further our mission of serving patients by advancing and replenishing the Amgen therapeutic pipeline. In this role you will apply your expertise in data science and disease biology to accelerate the identification, prioritization, and validation of transformative therapeutic targets in a dynamic cross-functional research environment.

Job Responsibility:

  • Extracting biological insight from complex multi-modal omics and screening data to characterize disease endotypes and mechanisms, identify novel targets and biomarkers, and test therapeutic hypotheses
  • Developing and leveraging methods/platforms to discover, prioritize, and validate targets across diverse diseases and therapeutic modalities
  • Innovative research in close partnership with Amgen therapeutic area scientists, spanning both internal pipeline programs and external partnerships
  • Partnering with our data science and information systems teams to incorporate tools and analyses developed within ARIA Computational Biology into integrated R&D platforms

Requirements:

  • Doctorate in computational biology, bioinformatics, data science, or a related discipline [and relevant post-doc where applicable]
  • Master’s degree and 3 years of relevant research experience
  • Bachelor’s degree and 5 years of relevant research experience
  • Strong programming skills (Python, R, Linux/Unix), familiarity with cloud computing environments, HPC, and collaborative coding practices (e.g., Git)
  • Track record of designing and implementing creative and holistic computational strategies to address challenging research questions
  • Demonstrated expertise in the analysis and interpretation of single cell omics data
  • Excellent presentation and communication skills to convey complex findings to diverse audiences
  • Self-starter with a collaborative mentality and a drive for continuous growth

Nice to have:

  • Strong background in cardiometabolic disease and/or immunology, including application to the interpretation of single-cell data
  • Experience leveraging and fine-tuning transcriptional foundation models, LLMs, and biomedical knowledge graphs to further research goals
  • Familiarity with public data resources (e.g. DepMap, Human Cell Atlas, TCGA, GTEx, and Tahoe-100M) frequently used to augment analyses of internally generated data
  • Experience developing and deploying tools and pipelines to endpoints such as interactive portals (e.g. RShiny apps), workflow management systems (e.g Nextflow), and agentic frameworks
What we offer:
  • A comprehensive employee benefits package, including a Retirement and Savings Plan with generous company contributions, group medical, dental and vision coverage, life and disability insurance, and flexible spending accounts
  • A discretionary annual bonus program, or for field sales representatives, a sales-based incentive plan
  • Stock-based long-term incentives
  • Award-winning time-off plans
  • Flexible work models, including remote and hybrid work arrangements, where possible

Additional Information:

Job Posted:
December 18, 2025

Employment Type:
Fulltime
Work Type:
Remote work
Job Link Share:

Looking for more opportunities? Search for other job offers that match your skills and interests.

Briefcase Icon

Similar Jobs for Senior Scientist – Research Computational Biology

Scientist, Biological Sciences

An exciting opportunity is available to join Altos Labs. We are seeking highly m...
Location
Location
United States , San Diego
Salary
Salary:
116450.00 - 247000.00 USD / Year
altoslabs.com Logo
Altos Labs
Expiration Date
Until further notice
Flip Icon
Requirements
Requirements
  • PhD and a documented record of professional achievement in the form of impactful publications
  • Excellent computer skills, including advanced proficiency with Google apps, Excel, and Powerpoint graphic skills to produce documents and manage office projects
  • Excellent professional writing skills and the ability to attune through writing and presentations to a variety of audiences including senior executives through entry-level employees
  • Problem-solving skills sufficient to identify issues, conduct research, and develop innovative solutions
  • Ability to maintain cooperative working relationships with a broad range of people, including staff colleagues, lab members, faculty, outside agencies and collaborators, and the community
  • Demonstrated high productivity and ability to complete work in a timely manner
  • Ability to organize work and set priorities
  • Ability to focus on details to produce accurate, quality work driven by deadlines
  • Ability to work in a dynamic environment and with others in a team
  • Strengths in dealing with ambiguity
Job Responsibility
Job Responsibility
  • Engage in ground-breaking and innovative science
  • Support and manage internal/external collaborations in one or more multidisciplinary projects to accelerate essential research activities
  • Study the mechanistic basis of cell programming for health and rejuvenation
  • Responsible for mentoring graduate students
  • Responsible for developing project-specific experimental strategies, techniques, and procedures
  • Responsible for helping PI train lab members, including scientists and technicians
  • Contribute to writing and dissemination of research results
  • Carry out research projects in collaboration with the PI
Read More
Arrow Right

Senior Bioinformatics Scientist

Job Advert: Senior Bioinformatics Scientist. Our client is an emerging leader wi...
Location
Location
United States , San Francisco
Salary
Salary:
170000.00 - 190000.00 USD / Year
signifytechnology.com Logo
Signify Technology
Expiration Date
Until further notice
Flip Icon
Requirements
Requirements
  • PhD in Biological Sciences, Bioinformatics, Computational Biology, or related field, with 3+ years of experience developing production-level bioinformatics pipelines
  • Deep expertise in analyzing bulk/single-cell RNAseq data and performing differential gene expression using state-of-the-art tools
  • Significant experience building production-level Snakemake (or Nextflow) pipelines, with local and cloud-based deployments
  • Strong knowledge of sequence analysis (alignment, assembly) and molecular biology, with experience in Oxford Nanopore and Illumina sequencing
  • Proficiency in Python (numpy, pandas, Jupyter, Biopython) and package management (e.g., Conda)
  • Hands-on experience with Docker, Apptainer, or Singularity for containerized workflows
  • Expertise in Git/GitHub and Linux shell scripting for version control and automation
  • Proficiency in developing intuitive web tools for bioinformatics reporting (e.g., R Shiny, Streamlit)
  • Familiarity with public genomic data repositories (e.g., NCBI, Ensembl) and large-scale genomic data processing
  • Strong communication skills and ability to write clean, maintainable, production-ready code
Job Responsibility
Job Responsibility
  • Designing and optimizing high-performance bioinformatics pipelines for processing thousands of daily samples, leveraging tools like Snakemake and cloud deployments
  • Innovating sequence analysis workflows for bulk/single-cell RNAseq, differential gene expression, and large-scale genomics, ensuring robust and scalable solutions
  • Troubleshooting complex sequencing data challenges, from biological artifacts to platform-specific issues, to ensure reliable outputs
  • Developing intuitive web tools (e.g., Streamlit, R Shiny) and data visualizations to transform raw bioinformatics data into actionable insights
  • Providing thought leadership and mentoring junior team members, fostering a culture of innovation and collaboration
  • Staying ahead of industry trends, integrating emerging bioinformatics tools to enhance our offerings for biopharma and research clients
What we offer
What we offer
  • Competitive Compensation: Highly competitive remuneration
  • Generous Time Off: 4 weeks paid time off + 10 paid holidays
  • Comprehensive Health Coverage: Health, dental, and vision insurance, plus life insurance and mental health coverage
  • Retirement and Wellness: 401(k) with matching, Health Advocate services, and gym membership
  • Impactful Work: Contribute directly to accelerating biotech research, supporting novel therapies and sustainability
  • Innovative Environment: Work with cutting-edge tools (e.g., Snakemake, Streamlit, AWS) and collaborate with top-tier researchers
  • Supportive Culture: Join a passionate, inclusive team that values creativity, mentorship, and professional growth
  • Fulltime
Read More
Arrow Right

Senior / Principal Machine Learning Scientist

Our mission is to restore cell health and resilience through cell rejuvenation t...
Location
Location
United Kingdom , Cambridge
Salary
Salary:
136000.00 - 261050.00 GBP / Year
altoslabs.com Logo
Altos Labs
Expiration Date
Until further notice
Flip Icon
Requirements
Requirements
  • Ph.D. in Machine Learning, Computer Science, Artificial Intelligence, Statistics, or a related quantitative field
  • 6+ years of relevant post-PhD work experience in either an academic or industry setting
  • Proven experience developing and applying complex machine learning models
  • A strong track record of leading and publishing innovative, peer-reviewed research in top-tier ML conferences or high-impact scientific journals
  • Excellent scientific communication skills
  • Expertise in several of the following: deep learning, reinforcement learning, generative models, language models, computer vision, Bayesian inference, causal reasoning & inference, transfer & multi-task learning, graph neural networks, active learning, hybrid mechanistic/ML models
  • Proven experience applying sophisticated ML techniques to molecular and cell biological data sets
Job Responsibility
Job Responsibility
  • Pioneer novel machine learning methodologies and statistical frameworks
  • Contribute to setting the long-term technical vision and research strategy for a core domain within the Institute of Computation
  • Translate your deep understanding of the mathematical and theoretical underpinnings of cutting-edge AI research into high-impact applications
  • Design, implement, and optimize large-scale machine learning systems using modern frameworks and agile practices
  • Develop and manage efficient distributed training strategies across multiple GPUs and compute clusters
  • Develop robust approaches for multi-modal data integration and cross-domain mapping to extract actionable biological insights
  • Apply computational thinking to solve problems in drug target identification, compound assessment, and prediction of cellular perturbation responses
  • Lead the full ML development lifecycle from theoretical conception and data strategy through model development, training, and evaluation
  • Act as a key technical mentor to Machine Learning Scientists and Engineers
  • Fulltime
Read More
Arrow Right

Senior / Principal Machine Learning Scientist

Our mission is to restore cell health and resilience through cell rejuvenation t...
Location
Location
United States , Redwood City; San Diego
Salary
Salary:
260950.00 - 509450.00 USD / Year
altoslabs.com Logo
Altos Labs
Expiration Date
Until further notice
Flip Icon
Requirements
Requirements
  • Ph.D. in Machine Learning, Computer Science, Artificial Intelligence, Statistics, or a related quantitative field
  • 6+ years of relevant post-PhD work experience in either an academic or industry setting
  • Proven experience developing and applying complex machine learning models
  • A strong track record of leading and publishing innovative, peer-reviewed research in top-tier ML conferences or high-impact scientific journals
  • Excellent scientific communication skills
  • Expertise in several of the following: deep learning, reinforcement learning, generative models, language models, computer vision, Bayesian inference, causal reasoning & inference, transfer & multi-task learning, graph neural networks, active learning, hybrid mechanistic/ML models
  • Proven experience applying sophisticated ML techniques to molecular and cell biological data sets
Job Responsibility
Job Responsibility
  • Pioneer novel machine learning methodologies and statistical frameworks
  • Contribute to setting the long-term technical vision and research strategy for a core domain
  • Translate your deep understanding of the mathematical and theoretical underpinnings of cutting-edge AI research into high-impact applications
  • Design, implement, and optimize large-scale machine learning systems
  • Develop and manage efficient distributed training strategies across multiple GPUs and compute clusters
  • Develop robust approaches for multi-modal data integration and cross-domain mapping
  • Apply computational thinking to solve problems in drug target identification, compound assessment, and prediction of cellular perturbation responses
  • Lead the full ML development lifecycle
  • Act as a key technical mentor to Machine Learning Scientists and Engineers
Read More
Arrow Right

Research Associate

Ready to redefine what's possible in molecular diagnostics? Join a team of brill...
Location
Location
United States , Menlo Park
Salary
Salary:
73920.00 - 84480.00 USD / Year
billiontoone.com Logo
BillionToOne
Expiration Date
Until further notice
Flip Icon
Requirements
Requirements
  • BS or MS in Molecular and Cell Biology, Microbiology, Biophysics, Biochemistry, or related field
  • 1-2 years of research experience (either during BS/MS or afterwards)
  • Previous experience with standard molecular biology techniques (in particular, extensive experience with PCR, electrophoresis, DNA purifications)
  • An ability to quickly learn mathematical, analytical, and experimental concepts
  • High mathematical and statistical aptitude (e.g., you find GRE math section to be extremely easy)
  • Great attention to detail
Job Responsibility
Job Responsibility
  • Perform experiments and assays under the guidance of Senior Scientists
  • Learn analytical and computational methodologies and analyze the results under the guidance of Senior Scientists
  • Assist Senior Scientists in assay development
  • Keep accurate and meticulous records of experimental details and results
  • Prepare biological samples and reagents to accelerate the R&D process
  • Manage, organize, and support lab operations
What we offer
What we offer
  • Working alongside brilliant, kind, passionate and dedicated colleagues, in an empowering environment, toward a global vision, striving for a future in which transformative molecular diagnostics can help millions of patients
  • Open, transparent culture that includes weekly Town Hall meetings
  • The ability to indirectly or directly change the lives of hundreds of thousands patients
  • Multiple medical benefit options
  • employee premiums paid 100% of select plans, dependents covered up to 80%
  • Extremely generous Family Bonding Leave for new parents (16 weeks, paid at 100%)
  • Supplemental fertility benefits coverage
  • Retirement savings program including a 4% Company match
  • Increase paid time off with increased tenure
  • Latest and greatest hardware (laptop, lab equipment, facilities)
  • Fulltime
Read More
Arrow Right

Senior Bioinformatics Scientist

The Senior Bioinformatics Scientist, with input from senior scientists and leade...
Location
Location
United States , San Diego
Salary
Salary:
128000.00 - 192000.00 USD / Year
exactsciences.com Logo
Exact Sciences
Expiration Date
Until further notice
Flip Icon
Requirements
Requirements
  • Ph.D. in bioinformatics, computational biology, computer science, mathematics, or related field
  • or Master’s degree in same fields plus 4 years of experience in lieu of a Ph.D.
  • or Bachelor’s degree in same fields plus 6 years of experience in lieu of Ph.D.
  • 5+ years of industry or academia experience in bioinformatics
  • 3+ years of experience in medical device/IVD, biotech, life science or pharmaceutical industry
  • Extensive experience in Linux-based HPC or cloud computing environments and associated tools
  • Ability to write custom code in at least three programming or scripting languages
  • Technical expert in the area of molecular biology and/or biochemistry and/or next-generation sequencing (NGS) and genomics
  • Knowledge of product/assay research, design, or development
  • Working knowledge of statistical and mathematical methods in biology/genetics, including experience with statistical software, such as JMP or R
Job Responsibility
Job Responsibility
  • Conduct analyses within several product or technology areas and identify problems and discrepancies
  • Independently develop, plan, and analyze results of bench level experiments within several product or technology areas
  • effectively present and clearly communicate findings at data meetings, group meetings and project team meetings
  • Analyze research/experimental data, interpret the results, and provide insights into the next steps and the direction of the project
  • Independently develop methods and procedures for new assignments/study/experiments
  • Provide technical guidance to junior scientists in project teams
  • Manage bench-generated data and bioinformatics outputs within high performance computing (HPC) or cloud computing environment
  • Determine, utilize, and apply methods or technologies effectively and provide ideas for new techniques, when appropriate
  • Maintain knowledge of technological industry developments that could assist in completion of an assignment or aid in the development of new processes or procedures
  • Provide technical input and participate in decisions affecting project planning and experimental design
What we offer
What we offer
  • Paid time off (including days for vacation, holidays, volunteering, and personal time)
  • Paid leave for parents and caregivers
  • A retirement savings plan
  • Wellness support
  • Health benefits including medical, prescription drug, dental, and vision coverage
  • Bonus eligibility
  • Fulltime
Read More
Arrow Right

Senior Data Scientist – Surfaceome Biology

We are seeking a highly qualified and motivated Senior Data Scientist with a str...
Location
Location
India , Hyderabad
Salary
Salary:
Not provided
amgen.com Logo
Amgen
Expiration Date
Until further notice
Flip Icon
Requirements
Requirements
  • Any degree and 8-13 years of directly related experience
  • Demonstrated expertise in computational and data science method development for short- and long-read transcriptomics, polysome sequencing, proteomics, multi-omics integration, or surfaceome characterization
  • Strong background in machine learning and AI, including deep learning and generative modeling
  • experience with pre-training, fine-tuning, and few-/zero-shot learning, ideally experience with in silico modeling of cellular surface protein biology
  • Proven track record of applying computational methods to drive biological insights, target validation, biomarker discovery, or therapeutic hypothesis generation
  • Proficiency in scientific programming languages and tool development using Python, R, or similar, with familiarity in relevant libraries and frameworks
  • Experience with large-scale data processing using cloud computing, workflow development, and software best practices (e.g., version control, continuous integration, test-driven development)
  • Familiarity with agentic AI, digital innovation approaches, and FAIR data principles for building robust and scalable analytical workflows
  • Familiarity with molecular and disease biology, with the ability to contextualize computational findings in therapeutic discovery
  • Excellent analytical and communication skills, with the ability to extract and clearly present insights from complex data to diverse audiences with rigor and accuracy
Job Responsibility
Job Responsibility
  • Develop novel AI/ML, computational, and data science methods – including agentic AI systems – for processing, integrating, and analyzing multi-modal datasets (e.g., transcriptomics, proteomics, imaging, and single-cell multi-omics) to identify and prioritize novel and target-tissue specific cell surface antigens
  • Build workflows to harmonize and integrate public and internal datasets for constructing comprehensive multi-modal surfaceome atlases, and model protein expression heterogeneity across cell types, states, and spatial contexts
  • Design computational tools and predictive models for protein localization, topology, and internalization behavior to prioritize candidate surface proteins or antigen–ligand pairs for the discovery of multispecific antibody modalities and therapeutic payload delivery
  • Apply generative modeling and representation learning to propose novel antigen candidates or antigen combinations with desirable therapeutic attributes, such as accessibility, specificity, and internalization potential
  • Collaborate with experimental and translational teams to design and guide validation experiments, ensuring computational predictions translate into actionable biological insights
Read More
Arrow Right

Senior Bioinformatics Scientist

At Boston Children’s Hospital, the quality of our care – and our inclusive hospi...
Location
Location
United States , Boston
Salary
Salary:
83241.60 - 133192.80 USD / Year
childrenshospital.org Logo
Boston Children's Hospital
Expiration Date
Until further notice
Flip Icon
Requirements
Requirements
  • Bachelor’s degree in science, technology, engineering or mathematics
  • A minimum of one year of position-specific experience
  • Extensive knowledge of the use of bioinformatics computations in high-performance computing environments and web development, including open-source bioinformatics software and pipelines to support diverse bioinformatics analyses such as single-cell RNA-seq, bulk RNA-seq, proteomics, etc.
  • Extensive knowledge of technologies used in support of biomedical research, such as programming languages (R and Python), databases (SQL), version control (Git), scientific workflow tools and high-performance computing clusters
  • Ability to resolve a wide range of complex Research Computing assignments in support of biomedical research
  • Ability to routinely lead complex projects and coordinate project teams
  • readiness to seek advice and guidance when needed and to operate effectively in collaboration with scientists and clinicians
  • ability to follow, improve and create technical documentation and standard operating procedures
  • Strong publication record
  • Ability to effectively convey messages through written communication that are tailored to target audience
Job Responsibility
Job Responsibility
  • Providing computational support by applying a wide range of bioinformatics tools and technologies
  • completing assignments independently and on time
  • consistently adhering to and promoting standard operating procedures and best practices
  • maintaining and upgrading research computing tools and technologies, migrating data, documenting changes, and adjusting internal processes
  • Routinely leading or participating in complex Research Computing projects with other members from the BCH research community
  • setting goals and objectives for projects and demonstrating achievement of those goals and objectives
  • coordinating work activities with other stakeholders
  • contributing to the resulting presentations and/or publications
  • Training staff and researchers
  • effectively tailoring presentations
What we offer
What we offer
  • flexible schedules
  • affordable health, vision and dental insurance
  • child care and student loan subsidies
  • generous levels of time off
  • 403(b) Retirement Savings plan
  • Pension
  • Tuition and certain License and Certification Reimbursement
  • cell phone plan discounts
  • discounted rates on T-passes
  • Fulltime
Read More
Arrow Right