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Research Scientist – Proteomics Workflow Innovation

Germany, Heidelberg · Job Posted May 27, 2026
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Job Description

We are seeking a highly motivated Research Scientist – Proteomics Workflow Innovation (m/f/d) with strong practical expertise in LC–MS-based proteomics and a passion for data analysis, interpretation, and generation of biological insight. This role is ideal for a scientist who combines experimental expertise with the ability to translate complex data into meaningful conclusions and drive innovation in proteomics workflows. The successful candidate will play a key role in designing, developing, and benchmarking next-generation proteomics and secretomics workflows across diverse biological systems, while leading the interpretation of complex datasets. This includes establishing robust, scalable, and reproducible workflows that deliver high-quality data and enable biologically meaningful insights. The role requires a strong data-first mindset, ensuring that workflows are optimized for downstream analysis and decision-making.

Job Responsibility

  • Design, develop, and benchmark innovative LC–MS-based proteomics and secretomics workflows across diverse biological systems
  • Evaluate and implement fit-for-purpose methods based on performance metrics such as data quality, reproducibility, and biological relevance
  • Establish robust, scalable, and reproducible workflows for high-quality data generation
  • Drive end-to-end understanding of proteomics datasets, from experiments to biological interpretation and hypothesis generation
  • Partner with computational and data science teams to ensure appropriate data processing, accessibility, and usability
  • Translate experiments into standardized and scalable workflows
  • Contribute to documentation (SOPs, reports) to ensure reproducibility and knowledge sharing
  • Collaborate across multidisciplinary matrix teams and communicate scientific findings effectively to both technical and non-technical stakeholders

Requirements

  • MSc or PhD in Biochemistry, Proteomics, Analytical Chemistry, or related discipline
  • Hands-on experience in LC–MS-based proteomics workflows
  • Experience working at the interface of wet-lab and computational analysis
  • Demonstrated experience in data analysis and interpretation of proteomics datasets
  • Strong ability to connect experimental data to biological context and hypothesis generation
  • Excellent problem-solving and communication skills
  • Programming and data analysis skills (e.g., Python, R) and familiarity with AI/ML are desirable
  • Experience with secretomics or extracellular proteomics workflows is preferred
  • Exposure to metabolomics workflows and multi-omics data integration is advantageous

Nice to have

  • Programming and data analysis skills (e.g., Python, R) and familiarity with AI/ML are desirable
  • Experience with secretomics or extracellular proteomics workflows is preferred
  • Exposure to metabolomics workflows and multi-omics data integration is advantageous

What we offer

  • Competitive base salary
  • Annual bonus based on company performance
  • Flexible working options available for most roles
  • Learning and career development
  • Access to healthcare & wellbeing programmes
  • Employee recognition programmes
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