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The Department of Diagnostic Medicine/Pathobiology at Kansas State University College of Veterinary Medicine seeks to recruit a Research Assistant Professor to contribute to high-impact research in virus evolution, genomic diversification, and host–pathogen interactions. This is a 12-month, non-tenure track position with a predominantly research-focused appointment. The successful candidate will design and execute controlled viral evolution experiments and apply advanced sequencing and bioinformatic approaches to characterize viral population diversity, recombination processes, and structural genome variation.
Job Responsibility:
Design and execute controlled viral evolution experiments
Apply advanced sequencing and bioinformatic approaches to characterize viral population diversity, recombination processes, and structural genome variation
Requirements:
PhD in Virology, Microbiology, or a related discipline
Demonstrated expertise in virus culture systems, experimental evolution, and genomic sequencing technologies
Strong publication record in virus evolution and/or viral genomics
Experience in interdisciplinary, data-intensive research environments
Extensive experience in next-generation sequencing technologies, including both Illumina short-read and Oxford Nanopore long-read platforms
Strong programming skills (e.g., Python, R, or comparable languages)
Experience working in high-performance computing environments
Nice to have:
Experience working with large DNA viruses (e.g., herpesviruses)
Detailed knowledge of viral polymerase fidelity and proofreading mechanisms
Demonstrated expertise in long-read sequencing–based approaches to resolve recombination and structural variation
Experience analyzing defective viral genomes
Experience resolving complex population structures
Experience linking molecular mechanisms to evolutionary outcomes